Table 2 Genomic identification of virulence factors in the genome of R. planticola ATCC 33531
Genes present in Raoultella Planticola (Accession CP 019899.1) | Â | Blast results against R. Planticola genome | Â | |||
|---|---|---|---|---|---|---|
Gene name | Gene ID | Max score | Total score | Query cover (%) | E-value | Identity (%) |
LPS biosynthesis protein WzzE | NC_016845.1 | 28696 | 4.24E+06 | 71 | 0.0 | 93 |
O-acetyltransferase | NC_016845.1 | 2143 | 2143 | 67 | 0.0 | 82 |
Major type 1 subunit fimbria | 2546382621 | Â | No significant similarity found | Â | ||
Pilin (type 1 fimbria component protein) | 2546385281 | Â | No significant similarity found | Â | ||
KpsS (capsule synthesis) | NC_025184.1 | 2146 | 2.01E+04 | 5 | 0.0 | 99 |
Uncharacterized protein related to capsule biosynthesis enzymes | NC_010870.1 | 2100 | 10206 | 1 | 0.0 | 99 |
Capsule assembly protein Wzi | 2549022389 | 950 | 950 | 94 | 0.0 | 79 |
Periplasmic chaperone for outer membrane proteins Skp | 2546385958 | 693 | 693 | 100 | 0.0 | 92 |
Periplasmic chaperone for outer membrane proteins SurfA | 2546385592 | 1474 | 1474 | 100 | 0.0 | 87 |
Regulator of mucoid phenotype rmpA | 2657583 | Â | No significant similarity found | Â | ||
Regulator of mucoid phenotype rmpA2 | 2657677 | Â | No significant similarity found | Â | ||
Putative negative regulator of RcsB-dependent stress response | 2549023015 | 538 | 538 | 100 | 3.00E-153 | 82 |
Regulator of capsule synthesis rcsA | CIG23_03380 | 299 | 299 | 100 | 1.00E-93 | 69 |